Files
duplicacy/src/duplicacy_entrylist.go
Alexander Welsing 039b749a3e Fixed typo incomlete -> incomplete
"Previous incomlete backup contains %d files and %d chunks -> "Previous incomplete backup contains %d files and %d chunks
2023-01-12 12:41:45 +01:00

575 lines
17 KiB
Go

// Copyright (c) Acrosync LLC. All rights reserved.
// Free for personal use and commercial trial
// Commercial use requires per-user licenses available from https://duplicacy.com
package duplicacy
import (
"encoding/hex"
"encoding/binary"
"fmt"
"os"
"io"
"path"
"crypto/sha256"
"crypto/rand"
"sync"
"github.com/vmihailenco/msgpack"
)
// This struct stores information about a file entry that has been modified
type ModifiedEntry struct {
Path string
Size int64
Hash string
}
// EntryList is basically a list of entries, which can be kept in the memory, or serialized to a disk file,
// depending on if maximumInMemoryEntries is reached.
//
// The idea behind the on-disk entry list is that entries are written to a disk file as they are coming in.
// Entries that have been modified and thus need to be uploaded will have their Incomplete bit set (i.e.,
// with a size of -1). When the limit is reached, entries are moved to a disk file but ModifiedEntries and
// UploadedChunks are still kept in memory. When later entries are read from the entry list, incomplete
// entries are back-annotated with info from ModifiedEntries and UploadedChunk* before sending them out.
type EntryList struct {
onDiskFile *os.File // the file to store entries
encoder *msgpack.Encoder // msgpack encoder for entry serialization
entries []*Entry // in-memory entry list
SnapshotID string // the snapshot id
Token string // this unique random token makes sure we read/write
// the same entry list
ModifiedEntries []ModifiedEntry // entries that will be uploaded
UploadedChunkHashes []string // chunks from entries that have been uploaded
UploadedChunkLengths []int // chunk lengths from entries that have been uploaded
uploadedChunkLock sync.Mutex // lock for UploadedChunkHashes and UploadedChunkLengths
PreservedChunkHashes []string // chunks from entries not changed
PreservedChunkLengths []int // chunk lengths from entries not changed
Checksum string // checksum of all entries to detect disk corruption
maximumInMemoryEntries int // max in-memory entries
NumberOfEntries int64 // number of entries (not including directories and links)
cachePath string // the directory for the on-disk file
// These 3 variables are used in entry infomation back-annotation
modifiedEntryIndex int // points to the current modified entry
uploadedChunkIndex int // counter for upload chunks
uploadedChunkOffset int // the start offset for the current modified entry
}
// Create a new entry list
func CreateEntryList(snapshotID string, cachePath string, maximumInMemoryEntries int) (*EntryList, error) {
token := make([]byte, 16)
_, err := rand.Read(token)
if err != nil {
return nil, fmt.Errorf("Failed to create a random token: %v", err)
}
entryList := &EntryList {
SnapshotID: snapshotID,
maximumInMemoryEntries: maximumInMemoryEntries,
cachePath: cachePath,
Token: string(token),
}
return entryList, nil
}
// Create the on-disk entry list file
func (entryList *EntryList)createOnDiskFile() error {
file, err := os.OpenFile(path.Join(entryList.cachePath, "incomplete_files"), os.O_RDWR|os.O_CREATE|os.O_TRUNC, 0600)
if err != nil {
return fmt.Errorf("Failed to create on disk entry list: %v", err)
}
entryList.onDiskFile = file
entryList.encoder = msgpack.NewEncoder(file)
err = entryList.encoder.EncodeString(entryList.Token)
if err != nil {
return fmt.Errorf("Failed to create on disk entry list: %v", err)
}
for _, entry := range entryList.entries {
err = entry.EncodeWithHash(entryList.encoder)
if err != nil {
return err
}
}
return nil
}
// Add an entry to the entry list
func (entryList *EntryList)AddEntry(entry *Entry) error {
if !entry.IsDir() && !entry.IsLink() {
entryList.NumberOfEntries++
}
if !entry.IsComplete() {
if entry.IsDir() || entry.IsLink() {
entry.Size = 0
} else {
modifiedEntry := ModifiedEntry {
Path: entry.Path,
Size: -1,
}
entryList.ModifiedEntries = append(entryList.ModifiedEntries, modifiedEntry)
}
}
if entryList.onDiskFile != nil {
return entry.EncodeWithHash(entryList.encoder)
} else {
entryList.entries = append(entryList.entries, entry)
if entryList.maximumInMemoryEntries >= 0 && len(entryList.entries) > entryList.maximumInMemoryEntries {
err := entryList.createOnDiskFile()
if err != nil {
return err
}
}
}
return nil
}
// Add a preserved chunk that belongs to files that have not been modified
func (entryList *EntryList)AddPreservedChunk(chunkHash string, chunkSize int) {
entryList.PreservedChunkHashes = append(entryList.PreservedChunkHashes, chunkHash)
entryList.PreservedChunkLengths = append(entryList.PreservedChunkLengths, chunkSize)
}
// Add a chunk just uploaded (that belongs to files that have been modified)
func (entryList *EntryList)AddUploadedChunk(chunkIndex int, chunkHash string, chunkSize int) {
entryList.uploadedChunkLock.Lock()
for len(entryList.UploadedChunkHashes) <= chunkIndex {
entryList.UploadedChunkHashes = append(entryList.UploadedChunkHashes, "")
}
for len(entryList.UploadedChunkLengths) <= chunkIndex {
entryList.UploadedChunkLengths = append(entryList.UploadedChunkLengths, 0)
}
entryList.UploadedChunkHashes[chunkIndex] = chunkHash
entryList.UploadedChunkLengths[chunkIndex] = chunkSize
entryList.uploadedChunkLock.Unlock()
}
// Close the on-disk file
func (entryList *EntryList) CloseOnDiskFile() error {
if entryList.onDiskFile == nil {
return nil
}
err := entryList.onDiskFile.Sync()
if err != nil {
return err
}
err = entryList.onDiskFile.Close()
if err != nil {
return err
}
entryList.onDiskFile = nil
return nil
}
// Return the length of the `index`th chunk
func (entryList *EntryList) getChunkLength(index int) int {
if index < len(entryList.PreservedChunkLengths) {
return entryList.PreservedChunkLengths[index]
} else {
return entryList.UploadedChunkLengths[index - len(entryList.PreservedChunkLengths)]
}
}
// Sanity check for each entry
func (entryList *EntryList) checkEntry(entry *Entry) error {
if entry.Size < 0 {
return fmt.Errorf("the file %s hash an invalid size (%d)", entry.Path, entry.Size)
}
if !entry.IsFile() || entry.Size == 0 {
return nil
}
numberOfChunks := len(entryList.PreservedChunkLengths) + len(entryList.UploadedChunkLengths)
if entry.StartChunk < 0 {
return fmt.Errorf("the file %s starts at chunk %d", entry.Path, entry.StartChunk)
}
if entry.EndChunk >= numberOfChunks {
return fmt.Errorf("the file %s ends at chunk %d while the number of chunks is %d",
entry.Path, entry.EndChunk, numberOfChunks)
}
if entry.EndChunk < entry.StartChunk {
return fmt.Errorf("the file %s starts at chunk %d and ends at chunk %d",
entry.Path, entry.StartChunk, entry.EndChunk)
}
if entry.StartOffset >= entryList.getChunkLength(entry.StartChunk) {
return fmt.Errorf("the file %s starts at offset %d of chunk %d with a length of %d",
entry.Path, entry.StartOffset, entry.StartChunk, entryList.getChunkLength(entry.StartChunk))
}
if entry.EndOffset > entryList.getChunkLength(entry.EndChunk) {
return fmt.Errorf("the file %s ends at offset %d of chunk %d with a length of %d",
entry.Path, entry.EndOffset, entry.EndChunk, entryList.getChunkLength(entry.EndChunk))
}
fileSize := int64(0)
for i := entry.StartChunk; i <= entry.EndChunk; i++ {
start := 0
if i == entry.StartChunk {
start = entry.StartOffset
}
end := entryList.getChunkLength(i)
if i == entry.EndChunk {
end = entry.EndOffset
}
fileSize += int64(end - start)
}
if entry.Size != fileSize {
return fmt.Errorf("the file %s has a size of %d but the total size of chunks is %d",
entry.Path, entry.Size, fileSize)
}
return nil
}
// An incomplete entry (with a size of -1) does not have 'startChunk', 'startOffset', 'endChunk', and 'endOffset'. This function
// is to fill in these information before sending the entry out.
func (entryList *EntryList) fillAndSendEntry(entry *Entry, entryOut func(*Entry)error) (skipped bool, err error) {
if entry.IsComplete() {
err := entryList.checkEntry(entry)
if err != nil {
return false, err
}
return false, entryOut(entry)
}
if entryList.modifiedEntryIndex >= len(entryList.ModifiedEntries) {
return false, fmt.Errorf("Unexpected file index %d (%d modified files)", entryList.modifiedEntryIndex, len(entryList.ModifiedEntries))
}
modifiedEntry := &entryList.ModifiedEntries[entryList.modifiedEntryIndex]
entryList.modifiedEntryIndex++
if modifiedEntry.Path != entry.Path {
return false, fmt.Errorf("Unexpected file path %s when expecting %s", modifiedEntry.Path, entry.Path)
}
if modifiedEntry.Size <= 0 {
return true, nil
}
entry.Size = modifiedEntry.Size
entry.Hash = modifiedEntry.Hash
entry.StartChunk = entryList.uploadedChunkIndex + len(entryList.PreservedChunkHashes)
entry.StartOffset = entryList.uploadedChunkOffset
entry.EndChunk = entry.StartChunk
endOffset := int64(entry.StartOffset) + entry.Size
for entryList.uploadedChunkIndex < len(entryList.UploadedChunkLengths) && endOffset > int64(entryList.UploadedChunkLengths[entryList.uploadedChunkIndex]) {
endOffset -= int64(entryList.UploadedChunkLengths[entryList.uploadedChunkIndex])
entry.EndChunk++
entryList.uploadedChunkIndex++
}
if entryList.uploadedChunkIndex >= len(entryList.UploadedChunkLengths) {
return false, fmt.Errorf("File %s has not been completely uploaded", entry.Path)
}
entry.EndOffset = int(endOffset)
entryList.uploadedChunkOffset = entry.EndOffset
if entry.EndOffset == entryList.UploadedChunkLengths[entryList.uploadedChunkIndex] {
entryList.uploadedChunkIndex++
entryList.uploadedChunkOffset = 0
}
err = entryList.checkEntry(entry)
if err != nil {
return false, err
}
return false, entryOut(entry)
}
// Iterate through the entries in this entry list
func (entryList *EntryList) ReadEntries(entryOut func(*Entry)error) (error) {
entryList.modifiedEntryIndex = 0
entryList.uploadedChunkIndex = 0
entryList.uploadedChunkOffset = 0
if entryList.onDiskFile == nil {
for _, entry := range entryList.entries {
skipped, err := entryList.fillAndSendEntry(entry.Copy(), entryOut)
if err != nil {
return err
}
if skipped {
continue
}
}
} else {
_, err := entryList.onDiskFile.Seek(0, os.SEEK_SET)
if err != nil {
return err
}
decoder := msgpack.NewDecoder(entryList.onDiskFile)
_, err = decoder.DecodeString()
if err != nil {
return err
}
for _, err = decoder.PeekCode(); err == nil; _, err = decoder.PeekCode() {
entry, err := DecodeEntryWithHash(decoder)
if err != nil {
return err
}
skipped, err := entryList.fillAndSendEntry(entry, entryOut)
if err != nil {
return err
}
if skipped {
continue
}
}
if err != io.EOF {
return err
}
}
return nil
}
// When saving an incomplete snapshot, the on-disk entry list ('incomplete_files') is renamed to
// 'incomplete_snapshot', and this EntryList struct is saved as 'incomplete_chunks'.
func (entryList *EntryList) SaveIncompleteSnapshot() {
entryList.uploadedChunkLock.Lock()
defer entryList.uploadedChunkLock.Unlock()
if entryList.onDiskFile == nil {
err := entryList.createOnDiskFile()
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to create the incomplete snapshot file: %v", err)
return
}
for _, entry := range entryList.entries {
err = entry.EncodeWithHash(entryList.encoder)
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to save the entry %s: %v", entry.Path, err)
return
}
}
}
err := entryList.onDiskFile.Close()
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to close the on-disk file: %v", err)
return
}
filePath := path.Join(entryList.cachePath, "incomplete_snapshot")
if _, err := os.Stat(filePath); err == nil {
err = os.Remove(filePath)
if err != nil {
LOG_WARN("INCOMPLETE_REMOVE", "Failed to remove previous incomplete snapshot: %v", err)
}
}
err = os.Rename(path.Join(entryList.cachePath, "incomplete_files"), filePath)
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to rename the incomplete snapshot file: %v", err)
return
}
chunkFile := path.Join(entryList.cachePath, "incomplete_chunks")
file, err := os.OpenFile(chunkFile, os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0600)
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to create the incomplete chunk file: %v", err)
return
}
defer file.Close()
encoder := msgpack.NewEncoder(file)
entryList.Checksum = entryList.CalculateChecksum()
err = encoder.Encode(entryList)
if err != nil {
LOG_WARN("INCOMPLETE_SAVE", "Failed to save the incomplete snapshot: %v", err)
return
}
LOG_INFO("INCOMPLETE_SAVE", "Incomplete snapshot saved to %s", filePath)
}
// Calculate a checksum for this entry list
func (entryList *EntryList) CalculateChecksum() string{
hasher := sha256.New()
for _, s := range entryList.UploadedChunkHashes {
hasher.Write([]byte(s))
}
buffer := make([]byte, 8)
for _, i := range entryList.UploadedChunkLengths {
binary.LittleEndian.PutUint64(buffer, uint64(i))
hasher.Write(buffer)
}
for _, s := range entryList.PreservedChunkHashes {
hasher.Write([]byte(s))
}
for _, i := range entryList.PreservedChunkLengths {
binary.LittleEndian.PutUint64(buffer, uint64(i))
hasher.Write(buffer)
}
for _, entry := range entryList.ModifiedEntries {
binary.LittleEndian.PutUint64(buffer, uint64(entry.Size))
hasher.Write(buffer)
hasher.Write([]byte(entry.Hash))
}
return hex.EncodeToString(hasher.Sum(nil))
}
// Check if all chunks exist in 'chunkCache'
func (entryList *EntryList) CheckChunks(config *Config, chunkCache map[string]bool) bool {
for _, chunkHash := range entryList.UploadedChunkHashes {
chunkID := config.GetChunkIDFromHash(chunkHash)
if _, ok := chunkCache[chunkID]; !ok {
return false
}
}
for _, chunkHash := range entryList.PreservedChunkHashes {
chunkID := config.GetChunkIDFromHash(chunkHash)
if _, ok := chunkCache[chunkID]; !ok {
return false
}
}
return true
}
// Recover the on disk file from 'incomplete_snapshot', and restore the EntryList struct
// from 'incomplete_chunks'
func loadIncompleteSnapshot(snapshotID string, cachePath string) *EntryList {
onDiskFilePath := path.Join(cachePath, "incomplete_snapshot")
entryListFilePath := path.Join(cachePath, "incomplete_chunks")
if _, err := os.Stat(onDiskFilePath); os.IsNotExist(err) {
return nil
}
if _, err := os.Stat(entryListFilePath); os.IsNotExist(err) {
return nil
}
entryList := &EntryList {}
entryListFile, err := os.OpenFile(entryListFilePath, os.O_RDONLY, 0600)
if err != nil {
LOG_WARN("INCOMPLETE_LOAD", "Failed to open the incomplete snapshot: %v", err)
return nil
}
defer entryListFile.Close()
decoder := msgpack.NewDecoder(entryListFile)
err = decoder.Decode(&entryList)
if err != nil {
LOG_WARN("INCOMPLETE_LOAD", "Failed to load the incomplete snapshot: %v", err)
return nil
}
checksum := entryList.CalculateChecksum()
if checksum != entryList.Checksum {
LOG_WARN("INCOMPLETE_LOAD", "Failed to load the incomplete snapshot: checksum mismatched")
return nil
}
onDiskFile, err := os.OpenFile(onDiskFilePath, os.O_RDONLY, 0600)
if err != nil {
LOG_WARN("INCOMPLETE_LOAD", "Failed to open the on disk file for the incomplete snapshot: %v", err)
return nil
}
decoder = msgpack.NewDecoder(onDiskFile)
token, err := decoder.DecodeString()
if err != nil {
LOG_WARN("INCOMPLETE_LOAD", "Failed to read the token for the incomplete snapshot: %v", err)
onDiskFile.Close()
return nil
}
if token != entryList.Token {
LOG_WARN("INCOMPLETE_LOAD", "Mismatched tokens in the incomplete snapshot")
onDiskFile.Close()
return nil
}
entryList.onDiskFile = onDiskFile
for i, hash := range entryList.UploadedChunkHashes {
if len(hash) == 0 {
// An empty hash means the chunk has not been uploaded in previous run
entryList.UploadedChunkHashes = entryList.UploadedChunkHashes[0:i]
entryList.UploadedChunkLengths = entryList.UploadedChunkLengths[0:i]
break
}
}
LOG_INFO("INCOMPLETE_LOAD", "Previous incomplete backup contains %d files and %d chunks",
entryList.NumberOfEntries, len(entryList.PreservedChunkLengths) + len(entryList.UploadedChunkHashes))
return entryList
}
// Delete the two incomplete files.
func deleteIncompleteSnapshot(cachePath string) {
for _, file := range []string{"incomplete_snapshot", "incomplete_chunks"} {
filePath := path.Join(cachePath, file)
if _, err := os.Stat(filePath); err == nil {
err = os.Remove(filePath)
if err != nil {
LOG_WARN("INCOMPLETE_REMOVE", "Failed to remove the incomplete snapshot: %v", err)
return
}
}
}
}